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SettingsResearch demo · not for clinical or commercial use
Corollary
  1. Catalog
  2. Protein Structure
  3. AlphaFold DB Lookup

Protein Structure · DeepMind / EMBL-EBI

AlphaFold DB Lookup

Fetch a pre-computed structure for any UniProt accession — 247M entries, instantly.

Commercial use permittedThe CC BY 4.0 licence allows use in commercial research and products.CC BY 4.0
Availability
Instant
Typical latency
700ms
Credits per run
Free
Compute tier
S · Micro

< 1s

Run this model

AlphaFold DB Lookup

UniProtKB accession, e.g. P00533 (human EGFR).

Needs uniprot accession

About this model

Before spending GPU time, check whether the structure already exists. AlphaFold DB holds predicted structures for 247 million proteins across the tree of life. Corollary queries it directly, returns the coordinates and the per-residue confidence, and tells you when a fresh prediction would actually add something.

Standardized I/O contract

Every model in the Hub speaks the same contract, which is what lets the Router and the agent call any of them without special-casing.

Inputs

  • accessionaccession · required

    UniProt accession

Outputs

pdbstructure

All-atom coordinates in PDB format, viewable and downloadable.

  • plddtvector

    pLDDT score per residue (0–100). Above 70 is generally reliable.

  • metadatatable

    Organism, gene, sequence length and model version.

  • Specification

    Hardware
    CPU only
    GPU memory
    CPU only
    Version
    4.0
    Licence
    CC BY 4.0
    Backend
    InstantLive data source
    MCP server
    mcp-protein-server

    Tasks

    structure retrieval

    Chains well with

    • DiffDockDiffusion docking: 38% top-1 success versus 23% for classical AutoDock.
    • Sequence AnalyticsComposition, molecular weight, isoelectric point and hydropathy — deterministic.
    lookupfree247m-structuresno-gpu