Library
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Labs, institutes and companies
Including 6 that run free and instantly
542 entries
Showing 48 of 542
DeepMind / EMBL-EBI
Fetch a pre-computed structure for any UniProt accession — 247M entries, instantly.
EvolutionaryScale / CZ Biohub
Single-sequence folding at state-of-the-art accuracy — no MSA, no waiting.
Corollary Labs
Lipinski, Veber and lead-likeness descriptors computed from SMILES — instantly, free.
FutureHouse
Grounded literature retrieval over the biomedical corpus — every claim cited.
RCSB Protein Data Bank
Experimentally determined coordinates and metadata for any PDB entry.
Corollary Labs
Composition, molecular weight, isoelectric point and hydropathy — deterministic.
DeepMind (served as BioNeMo NIM)
The reference MSA-based predictor, with managed MSA search included.
PharMolix / OpenBioMed
Reasoning-capable biomedical LLM with chain-of-thought over molecules.
MIT × Recursion
Structure and binding affinity in one pass, approaching FEP accuracy 1000× faster.
Seyone Chithrananda et al.
RoBERTa over SMILES — the fast, widely validated chemistry baseline.
MIT / Barzilay Lab
Diffusion docking: 38% top-1 success versus 23% for classical AutoDock.
Zhou et al., Northwestern
BPE-tokenised genomic BERT for motif, splice site and regulatory classification.
Meta FAIR
High-quality 1,280-dimensional protein embeddings for everything downstream.
Meta FAIR
The throughput workhorse of the ESM2 family — good embeddings, tiny footprint.
Arc Institute / Stanford
Genome-scale foundation model spanning nucleotide to whole-genome context.
Meta AI
Scientific LLM retained as a domain-knowledge evaluation baseline only.
IBM Research
One model across proteins, molecules and omics — SOTA on 9 of 11 discovery tasks.
IBM Research
SMILES transformer pre-trained on 1.1 billion molecules.
NVIDIA BioNeMo
Controlled molecule generation in a well-behaved latent space.
InstaDeep / Wellcome Sanger
DNA foundation model for regulatory elements, promoters and variant scoring.
Salesforce Research
Autoregressive protein generation up to 6.4B parameters, with an antibody variant.
Baker Lab
Inverse folding: given a backbone, design sequences that actually fold onto it.
Baker Lab / Institute for Protein Design
De novo backbone generation by denoising diffusion — the binder-design workhorse.
Google Health AI
Open therapeutics LLM covering 66 Therapeutic Data Commons tasks.
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